Stem-loop osa-MIR439b

Accession

MI0001692

Description

Oryza sativa osa-MIR439b precursor miRNA

Literature search

2 open access papers mention osa-MIR439b
(2 sentences)

Sequence

20250 reads, 98.0 reads per million, 140 experiments

uuccugucgaauUGUGGUUGUUCGAUAGGUAccccUGUCGAACCGCGGUUGUUCGAcagg
..((((((((((....((.((((((((((....)))))))))).))....))))))))))

Structure

uu          UGUG  U          U 
  ccugucgaau    GU GUUCGAUAGG A
  ||||||||||    || ||||||||||  
  ggacAGCUUG    CG CAAGCUGUcc c
--          UUGG  C          c 

Annotation confidence Medium

Genome context

10: 5572922-5572981 [+]

Mature osa-miR439b-5p

• Accession: MIMAT0055984
• Description: Oryza sativa osa-miR439b-5p mature miRNA
• Sequence: 13 - UGUGGUUGUUCGAUAGGUA - 31
• Evidence: experimental ; unknown

Mature osa-miR439b-3p

• Accession: MIMAT0001590
• Description: Oryza sativa osa-miR439b-3p mature miRNA
• Sequence: 36 - UGUCGAACCGCGGUUGUUCGA - 56
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 15805478
   Cloning and characterization of microRNAs from rice
   "Sunkar R, Girke T, Jain PK, Zhu JK"
   "Plant Cell (2005) 17:1397-1411