Dead hairpin entry

Stem-loop osa-MIR439c

Accession

MI0001693

Description

Oryza sativa osa-MIR439c precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

2 open access papers mention osa-MIR439c
(2 sentences)

Sequence

129796 reads, 590.0 reads per million, 142 experiments

uacccugucgaacugacgcaguucgacAUGUACCUGUCGAACUGUGGUUguucgauagguaucccUGUCGAACCGCGGUUGUUCGAcagggug
(((((((((((((...(((.((((((((.(((((((((((((.......)))))))))))))...)))))))).)))...)))))))))))))

Structure

             uga   a        --U             UG 
uacccugucgaac   cgc guucgacA   GUACCUGUCGAAC  U
|||||||||||||   ||| ||||||||   |||||||||||||  G
gugggacAGCUUG   GCG CAAGCUGU   uauggauagcuug  G
             UUG   C        ccc             UU