Stem-loop osa-MIR439c

Accession

MI0001693

Description

Oryza sativa osa-MIR439c precursor miRNA

Literature search

2 open access papers mention osa-MIR439c
(2 sentences)

Sequence

66 reads, 46 reads per million, 2 experiments

uacccugucgaacugacgcaguucgacauguaccugucgaacugugguuguucgauagguaucccUGUCGAACCGCGGUUGUUCGAcagggug
(((((((((((((...(((.((((((((.(((((((((((((.......)))))))))))))...)))))))).)))...)))))))))))))

Structure

             uga   a        --u             ug 
uacccugucgaac   cgc guucgaca   guaccugucgaac  u
|||||||||||||   ||| ||||||||   |||||||||||||  g
gugggacAGCUUG   GCG CAAGCUGU   uauggauagcuug  g
             UUG   C        ccc             uu 

Annotation confidence Not enough data

Genome context

Chr7: 8233825-8233917 [+]

Mature osa-miR439c

• Accession: MIMAT0001591
• Description: Oryza sativa osa-miR439c mature miRNA
• Sequence: 66 - UGUCGAACCGCGGUUGUUCGA - 86
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 15805478
   Cloning and characterization of microRNAs from rice
   "Sunkar R, Girke T, Jain PK, Zhu JK"
   "Plant Cell (2005) 17:1397-1411