Dead hairpin entry

Stem-loop osa-MIR439e

Accession

MI0001695

Description

Oryza sativa osa-MIR439e precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

2 open access papers mention osa-MIR439e
(2 sentences)

Sequence

132010 reads, 597.0 reads per million, 142 experiments

ccaccuacccugucgaacugacgcaguucgacAUGUACCUGUCGAACUGUGGUUguucgauagguaucccUGUCGAACCGCGGUUGUUCGAcagggug
.....(((((((((((((...(((.((((((((.(((((((((((((.......)))))))))))))...)))))))).)))...)))))))))))))

Structure

ccacc             uga   a        --U             UG 
     uacccugucgaac   cgc guucgacA   GUACCUGUCGAAC  U
     |||||||||||||   ||| ||||||||   |||||||||||||  G
     gugggacAGCUUG   GCG CAAGCUGU   uauggauagcuug  G
-----             UUG   C        ccc             UU