Dead hairpin entry

Stem-loop osa-MIR439f

Accession

MI0001696

Description

Oryza sativa osa-MIR439f precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

2 open access papers mention osa-MIR439f
(2 sentences)

Sequence

131296 reads, 596.0 reads per million, 142 experiments

accuacccugucgaacugacgcaguucgacAUGUACCUGUCGAACUGUGGUUguucgauagguaucccUGUCGAACCGCGGUUGUUCGAcagggug
...(((((((((((((...(((.((((((((.(((((((((((((.......)))))))))))))...)))))))).)))...)))))))))))))

Structure

acc             uga   a        --U             UG 
   uacccugucgaac   cgc guucgacA   GUACCUGUCGAAC  U
   |||||||||||||   ||| ||||||||   |||||||||||||  G
   gugggacAGCUUG   GCG CAAGCUGU   uauggauagcuug  G
---             UUG   C        ccc             UU