Stem-loop osa-MIR439f

Accession

MI0001696

Description

Oryza sativa osa-MIR439f precursor miRNA

Literature search

2 open access papers mention osa-MIR439f
(2 sentences)

Sequence

95 reads, 65 reads per million, 2 experiments

accuacccugucgaacugacgcaguucgacauguaccugucgaacugugguuguucgauagguaucccUGUCGAACCGCGGUUGUUCGAcagggug
...(((((((((((((...(((.((((((((.(((((((((((((.......)))))))))))))...)))))))).)))...)))))))))))))

Structure

acc             uga   a        --u             ug 
   uacccugucgaac   cgc guucgaca   guaccugucgaac  u
   |||||||||||||   ||| ||||||||   |||||||||||||  g
   gugggacAGCUUG   GCG CAAGCUGU   uauggauagcuug  g
---             UUG   C        ccc             uu 

Annotation confidence Not enough data

Genome context

Chr9: 16963024-16963119 [+]

Mature osa-miR439f

• Accession: MIMAT0001594
• Description: Oryza sativa osa-miR439f mature miRNA
• Sequence: 69 - UGUCGAACCGCGGUUGUUCGA - 89
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 15805478
   Cloning and characterization of microRNAs from rice
   "Sunkar R, Girke T, Jain PK, Zhu JK"
   "Plant Cell (2005) 17:1397-1411