Stem-loop osa-MIR439g

Accession

MI0001697

Description

Oryza sativa osa-MIR439g precursor miRNA

Literature search

2 open access papers mention osa-MIR439g
(2 sentences)

Sequence

109667 reads, 510.0 reads per million, 142 experiments

uccugucgaacugacgcaguucgacAUGUACCUGUCGAACUGUGGUUguucgauagguaucccUGUCGAACCGCGGUUGUUCGAcagg
.((((((((((...(((.((((((((.(((((((((((((.......)))))))))))))...)))))))).)))...))))))))))

Structure

u          uga   a        --U             UG 
 ccugucgaac   cgc guucgacA   GUACCUGUCGAAC  U
 ||||||||||   ||| ||||||||   |||||||||||||  G
 ggacAGCUUG   GCG CAAGCUGU   uauggauagcuug  G
-          UUG   C        ccc             UU 

Annotation confidence Low

Genome context

8: 3664228-3664315 [+]

Mature osa-miR439g-5p

• Accession: MIMAT0055989
• Description: Oryza sativa osa-miR439g-5p mature miRNA
• Sequence: 26 - AUGUACCUGUCGAACUGUGGUU - 47
• Evidence: experimental ; unknown

Mature osa-miR439g-3p

• Accession: MIMAT0001595
• Description: Oryza sativa osa-miR439g-3p mature miRNA
• Sequence: 64 - UGUCGAACCGCGGUUGUUCGA - 84
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 15805478
   Cloning and characterization of microRNAs from rice
   "Sunkar R, Girke T, Jain PK, Zhu JK"
   "Plant Cell (2005) 17:1397-1411