Dead hairpin entry

Stem-loop osa-MIR439g

Accession

MI0001697

Description

Oryza sativa osa-MIR439g precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

2 open access papers mention osa-MIR439g
(2 sentences)

Sequence

109667 reads, 510.0 reads per million, 142 experiments

uccugucgaacugacgcaguucgacAUGUACCUGUCGAACUGUGGUUguucgauagguaucccUGUCGAACCGCGGUUGUUCGAcagg
.((((((((((...(((.((((((((.(((((((((((((.......)))))))))))))...)))))))).)))...))))))))))

Structure

u          uga   a        --U             UG 
 ccugucgaac   cgc guucgacA   GUACCUGUCGAAC  U
 ||||||||||   ||| ||||||||   |||||||||||||  G
 ggacAGCUUG   GCG CAAGCUGU   uauggauagcuug  G
-          UUG   C        ccc             UU