miRBase entry: osa-MIR439i

Dead hairpin entry

Stem-loop osa-MIR439i


Accession
MI0001700
Description
Oryza sativa osa-MIR439i precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search
2 open access papers mention osa-MIR439i
(2 sentences)

Sequence


gcagggacauauccaacgggcaguguucgauaggggcguggcuacagugacacuacaauguuuuuuucuauuuuuaaaauuauuuaaucacaUGUCGAACCGCGGUUGUUCGAuagguacccugu
((((((((.((((.(((((.(.((((((((((.(((.((.((....)).)).))..((((.((((..........)))).))))......).))))))).)))).))))).)))).)).))))))

Structure
      -  a    c     g a   -       g ggcguggcuacagugacacuac    u    uucu 
gcaggg ac uauc aacgg c gug uucgaua g                      aaug uuuu    a
|||||| || |||| ||||| | ||| ||||||| |                      |||| ||||     
uguccc ug auAG UUGUU G CGC AAGCUGU c                      uuau aaaa    u
      a  g    C     G -   C       a ----------------acuaau    u    uuuu