Dead hairpin entry

Stem-loop osa-MIR443

Accession

MI0001708

Description

Oryza sativa osa-MIR443 precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

2 open access papers mention osa-MIR443
(2 sentences)

Sequence

19827 reads, 83.0 reads per million, 137 experiments

cgucccauaaaaacaaacccaaaacuagaugugauauaucacAAUACAAUAAAUCUGGAUAGgagucuauccagauacuucuaUCUAGAUUUAUUGUACUGGGAuaugucacauauauucaguuuuauauuuguuuuuuuuuuggacg
(((((...(((((((((...((((((..((((((((((((.((.((((((((((((((((((((((((....)))..))))))))))))))))))))).)).))))))))))))......))))))...))))))))).....)))))

Structure

     --cau         ccc      ----ag            a  A                     --   a 
cgucc     aaaaacaaa   aaaacu      augugauauauc cA UACAAUAAAUCUGGAUAGgag  ucu u
|||||     |||||||||   ||||||      |||||||||||| || |||||||||||||||||||||  |||  
gcagg     uuuuuguuu   uuuuga      uacacuguauAG GU AUGUUAUUUAGAUCUaucuuc  aga c
     uuuuu         aua      cuuaua            G  C                     au   c