Stem-loop mmu-mir-452

Accession

MI0001734

Symbol

MGI: Mir452

Description

Mus musculus mmu-mir-452 precursor miRNA mir-452

Gene
family

RF00839; mir-452

Literature search

8 open access papers mention mmu-mir-452
(14 sentences)

Sequence

3001 reads, 46 reads per million, 59 experiments

gcuaagcaguuacaacUGUUUGCAGAGGAAACUGAGACuuuauaacuaugucUCAGUCUCAUCUGCAAAGAGGUaagugcuuugc
((.(((((.((((..((.((((((((.((.((((((((...........)))))))).)).)))))))).)))))).))))).))

Structure

  u     g    aa  G        G  A        uuua 
gc aagca uuac  cU UUUGCAGA GA ACUGAGAC    u
|| ||||| ||||  || |||||||| || ||||||||    a
cg uucgu aaUG  GA AAACGUCU CU UGACUcug    a
  u     g    --  G        A  C        uauc 

Annotation confidence High

Genome context

chrX: 72262224-72262308 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mmu-mir-452

Mature mmu-miR-452-5p

• Accession: MIMAT0001637
• Description: Mus musculus mmu-miR-452-5p mature miRNA
• Sequence: 17 - UGUUUGCAGAGGAAACUGAGAC - 38
• Evidence: experimental ; Illumina [2-3]

Mature mmu-miR-452-3p

• Accession: MIMAT0017194
• Description: Mus musculus mmu-miR-452-3p mature miRNA
• Sequence: 53 - UCAGUCUCAUCUGCAAAGAGGU - 74
• Evidence: experimental ; Illumina [3]

References

1. PubMed ID: 20215419
   MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
   "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
   "Mol Hum Reprod (2010) 16:463-471


2. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009


3. PubMed ID: 15891114
   Clustering and conservation patterns of human microRNAs
   "Altuvia Y, Landgraf P, Lithwick G, Elefant N, Pfeffer S, Aravin A, Brownstein MJ, Tuschl T, Margalit H"
   "Nucleic Acids Res (2005) 33:2697-2706