Stem-loop dre-let-7g-1

Accession

MI0001873

Description

Danio rerio dre-let-7g-1 precursor miRNA

Literature search

39 open access papers mention dre-let-7g-1
(202 sentences)

Sequence

3045286 reads, 2899.0 reads per million, 299 experiments

gggggcuguggaaUGAGGUAGUAGUUUGUAUAGUUugggaucacaccagaucugggagauaaCUAUACAGCCUACUGUCUUUCUcacagcugcucc
((.(((((((((..((((((((((.(((((((((((.(((((......))))).).....)))))))))).)))))))))))).))))))).))..

Structure

--  g       -  aU          U          ----- g     ac 
  gg ggcugug ga  GAGGUAGUAG UUGUAUAGUU     u ggauc  a
  || ||||||| ||  |||||||||| ||||||||||     | |||||   
  uc ucgacac CU  UUCUGUCAUC GACAUAUCaa     g ucuag  c
cc  g       U  --          C          uagag g     ac 

Annotation confidence High

Genome context

chr23: 18382456-18382551 [-]

Mature dre-let-7g-5p

• Accession: MIMAT0001765
• Description: Danio rerio dre-let-7g-5p mature miRNA
• Sequence: 14 - UGAGGUAGUAGUUUGUAUAGUU - 35
• Evidence: experimental ; cloned [1]

Mature dre-let-7g-1-3p

• Accession: MIMAT0052749
• Description: Danio rerio dre-let-7g-1-3p mature miRNA
• Sequence: 63 - CUAUACAGCCUACUGUCUUUCU - 84
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 15937218
   The developmental miRNA profiles of zebrafish as determined by small RNA cloning
   "Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T"
   "Genes Dev (2005) 19:1288-1293