miRBase entry: dre-let-7g-2

Stem-loop dre-let-7g-2

Accession

MI0001874

Description

Danio rerio dre-let-7g-2 precursor miRNA

Literature search

39 open access papers mention dre-let-7g-2
(202 sentences)

Sequence

2191824 reads, 1888.0 reads per million, 300 experiments

guggacugugggaUGAGGUAGUAGUUUGUAUAGUUuuaggaucacaccagaucugggagauaaCUAUACAGUCUACUGUCUUUCccacgguuaccgc
(((((((((((((.((((((((((.((((((((((...(((((......))))).......)))))))))).)))))))))))))))))))..))))

Structure

    --         U          U          ----uua     ac 
gugg  acuguggga GAGGUAGUAG UUGUAUAGUU       ggauc  a
||||  ||||||||| |||||||||| ||||||||||       |||||   
cgcc  uggcaccCU UUCUGUCAUC GACAUAUCaa       ucuag  c
    au         -          U          uagaggg     ac

Annotation confidence High

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Genome context

chr23: 28536361-28536457 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from dre-let-7g-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dre-let-7g-5p

Accession	MIMAT0001765
Description	Danio rerio dre-let-7g-5p mature miRNA
Sequence	14 - UGAGGUAGUAGUUUGUAUAGUU - 35
Evidence	experimental cloned [1]
Database links
Predicted targets

Mature dre-let-7g-2-3p

Accession	MIMAT0052750
Description	Danio rerio dre-let-7g-2-3p mature miRNA
Sequence	64 - CUAUACAGUCUACUGUCUUUC - 84
Evidence	experimental cloned [1]

References

PubMed ID: 15937218
The developmental miRNA profiles of zebrafish as determined by small RNA cloning
"Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T"
"Genes Dev (2005) 19:1288-1293