Stem-loop dre-let-7i

Accession

MI0001876

Description

Danio rerio dre-let-7i precursor miRNA

Literature search

56 open access papers mention dre-let-7i
(221 sentences)

Sequence

2773116 reads, 2319.0 reads per million, 290 experiments

guguacuggcUGAGGUAGUAGUUUGUGCUGUUgguugggaugugacauugcccguuauggagaugaCUGCGCAAGCUACUCCCUUGCcagugcug
..((((((((.((((.((((((((((((.((..(((....((((((.......))))))..))).)).)))))))))))).))))))))))))..

Structure

gu        U    U            U  Ug   ggga      au 
  guacuggc GAGG AGUAGUUUGUGC GU  guu    ugugac  u
  |||||||| |||| |||||||||||| ||  |||    ||||||  g
  cgugacCG UUCC UCAUCGAACGCG Ca  uag    guauug  c
gu        -    C            U  -g   --ag      cc 

Annotation confidence High

Genome context

chr25: 1629655-1629749 [-]

Mature dre-let-7i-5p

• Accession: MIMAT0001767
• Description: Danio rerio dre-let-7i-5p mature miRNA
• Sequence: 11 - UGAGGUAGUAGUUUGUGCUGUU - 32
• Evidence: experimental ; cloned [1]

Mature dre-let-7i-3p

• Accession: MIMAT0052752
• Description: Danio rerio dre-let-7i-3p mature miRNA
• Sequence: 67 - CUGCGCAAGCUACUCCCUUGC - 87
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 15937218
   The developmental miRNA profiles of zebrafish as determined by small RNA cloning
   "Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T"
   "Genes Dev (2005) 19:1288-1293