Stem-loop dre-mir-9-7

Accession

MI0001886

Description

Danio rerio dre-mir-9-7 precursor miRNA

Literature search

22 open access papers mention dre-mir-9-7
(211 sentences)

Sequence

29617 reads, 989 reads per million, 11 experiments

ggguuaguuuuucUCUUUGGUUAUCUAGCUGUAUGAguuaugaaauaucaUAAAGCUAGAGAACCGAAAGUAgaaacuauaccu
((..((((((((((.(((((((.(((((((.(((((...........))))).))))))).))))))))).))))))))..)).

Structure

-  gu        -  C       A       G     guua 
 gg  uaguuuuu cU UUUGGUU UCUAGCU UAUGA    u
 ||  |||||||| || ||||||| ||||||| |||||    g
 cc  aucaaagA GA AAGCCAA AGAUCGA AUacu    a
u  au        U  -       G       A     auaa 

Annotation confidence High

Genome context

chr2: 59102169-59102252 [-]

Mature dre-miR-9-5p

• Accession: MIMAT0001769
• Description: Danio rerio dre-miR-9-5p mature miRNA
• Sequence: 14 - UCUUUGGUUAUCUAGCUGUAUGA - 36
• Evidence: experimental ; cloned [1]

Mature dre-miR-9-7-3p

• Accession: MIMAT0031933
• Description: Danio rerio dre-miR-9-7-3p mature miRNA
• Sequence: 51 - UAAAGCUAGAGAACCGAAAGUA - 72
• Evidence: not_experimental

References

1. PubMed ID: 15937218
   The developmental miRNA profiles of zebrafish as determined by small RNA cloning
   "Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T"
   "Genes Dev (2005) 19:1288-1293