Stem-loop dre-mir-26b

Accession

MI0001927

Description

Danio rerio dre-mir-26b precursor miRNA mir-26

Gene
family

RF00244; mir-26

Literature search

31 open access papers mention dre-mir-26b
(44 sentences)

Sequence

27323435 reads, 17524.0 reads per million, 303 experiments

gcauuuggccuuugccuggUUCAAGUAAUCCAGGAUAGGUUaguucccacuaguacggCCUAUUCUUGGUUACUUGUUUcaggaggaggcuacgagc
((.(.((((((((.(((((..(((((((((.(((((((((((((....)))).....))))))))).)))))))))..))))).)))))))).).))

Structure

  a u        g     UU         C         -----    u 
gc u uggccuuu ccugg  CAAGUAAUC AGGAUAGGU     Uagu c
|| | |||||||| |||||  ||||||||| |||||||||     ||||  
cg g aucggagg ggacU  GUUCAUUGG UCUUAUCCg     auca c
  a c        a     UU         U         gcaug    c 

Annotation confidence High

Genome context

chr23: 24675207-24675303 [-]

Mature dre-miR-26b-5p

• Accession: MIMAT0001795
• Description: Danio rerio dre-miR-26b-5p mature miRNA
• Sequence: 20 - UUCAAGUAAUCCAGGAUAGGUU - 41
• Evidence: experimental ; cloned [1]

Mature dre-miR-26b-3p

• Accession: MIMAT0060873
• Description: Danio rerio dre-miR-26b-3p mature miRNA
• Sequence: 59 - CCUAUUCUUGGUUACUUGUUU - 79
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 15937218
   The developmental miRNA profiles of zebrafish as determined by small RNA cloning
   "Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T"
   "Genes Dev (2005) 19:1288-1293