Stem-loop dre-mir-92a-2

Accession

MI0001952

Description

Danio rerio dre-mir-92a-2 precursor miRNA

Literature search

10 open access papers mention dre-mir-92a-2
(30 sentences)

Sequence

79943 reads, 4789 reads per million, 11 experiments

acagcaucccuuucuuugcAGGUUGGGAUCGGCCGCAAUGCUcugugcuggaagUAUUGCACUUGUCCCGGCCUGUgaagagcaugggaaauugu
((((..((((.((((((((((((((((((.((..((((((((((.....)).)))))))).)).))))))))))))))))))...))))..))))

Structure

    ca    --u                  C  CC        -  g 
acag  uccc   uucuuugcAGGUUGGGAU GG  GCAAUGCU cu u
||||  ||||   |||||||||||||||||| ||  |||||||| || g
uguu  aggg   gagaagUGUCCGGCCCUG UC  CGUUAUga gg c
    aa    uac                  U  -A        a  u 

Annotation confidence High

Genome context

chr9: 53436280-53436374 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from dre-mir-92a-2

Mature dre-miR-92a-3p

• Accession: MIMAT0001808
• Description: Danio rerio dre-miR-92a-3p mature miRNA
• Sequence: 55 - UAUUGCACUUGUCCCGGCCUGU - 76
• Evidence: experimental ; cloned [1]

Mature dre-miR-92a-2-5p

• Accession: MIMAT0031954
• Description: Danio rerio dre-miR-92a-2-5p mature miRNA
• Sequence: 20 - AGGUUGGGAUCGGCCGCAAUGCU - 42
• Evidence: not_experimental

References

1. PubMed ID: 15937218
   The developmental miRNA profiles of zebrafish as determined by small RNA cloning
   "Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T"
   "Genes Dev (2005) 19:1288-1293