Stem-loop dre-mir-124-4

Accession

MI0001969

Description

Danio rerio dre-mir-124-4 precursor miRNA

Literature search

23 open access papers mention dre-mir-124-4
(79 sentences)

Sequence

4345 reads, 188 reads per million, 7 experiments

gguuuuugcucuuUGUGUUCACAGUGGACCUUGAUuuaauuucaauacaauUAAGGCACGCGGUGAAUGCCAAgagagaagcc
(((((((.(((((.((((((((.(((..((((((((............))))))))..))).)))))))).))))))))))))

Structure

       g     U        A   GA        uaauu 
gguuuuu cucuu GUGUUCAC GUG  CCUUGAUu     u
||||||| ||||| |||||||| |||  ||||||||      
ccgaaga gagAA CGUAAGUG CGC  GGAAUuaa     c
       -     C        G   AC        cauaa 

Annotation confidence Medium

Genome context

chr17: 27402261-27402343 [+]

Mature dre-miR-124-3p

• Accession: MIMAT0001819
• Description: Danio rerio dre-miR-124-3p mature miRNA
• Sequence: 52 - UAAGGCACGCGGUGAAUGCCAA - 73
• Evidence: experimental ; cloned [1]

Mature dre-miR-124-4-5p

• Accession: MIMAT0031961
• Description: Danio rerio dre-miR-124-4-5p mature miRNA
• Sequence: 14 - UGUGUUCACAGUGGACCUUGAU - 35
• Evidence: not_experimental

References

1. PubMed ID: 15937218
   The developmental miRNA profiles of zebrafish as determined by small RNA cloning
   "Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T"
   "Genes Dev (2005) 19:1288-1293