Accession
MI0001978
Description
Danio rerio
dre-mir-125c precursor miRNA
Literature search
11 open access papers mention dre-mir-125c
(118 sentences)
(118 sentences)
Sequence
3267
reads,
208
reads per million, 11 experiments
gcucuccuccuguUCCCUGAGACCCUAACUCGUGAggucuuuuuccaaaaucACGGGUCAGGAGCUUGGGAGACagguggagggc
(((((((.((((((.((((((..(((.((((((((((.......))....)))))))).)))..)))))).)))))).)))))))
(((((((.((((((.((((((..(((.((((((((((.......))....)))))))).)))..)))))).)))))).)))))))
Structure
u C AC A ---- uc
gcucucc ccuguU CCUGAG CCU ACUCGUGA gg u
||||||| |||||| |||||| ||| |||||||| || u
cgggagg ggaCAG GGGUUC GGA UGGGCAcu cc u
u A GA C aaaa uu
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chr15: 29800968-29801052 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from dre-mir-125c
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature dre-miR-125c-5p
| Accession | MIMAT0001822 |
| Description | Danio rerio dre-miR-125c-5p mature miRNA |
| Sequence | 14 - UCCCUGAGACCCUAACUCGUGA - 35 |
| Evidence |
experimental
cloned [1] |
| Database links |
|
| Predicted targets |
|
Mature dre-miR-125c-3p
| Accession | MIMAT0031966 |
| Description | Danio rerio dre-miR-125c-3p mature miRNA |
| Sequence | 53 - ACGGGUCAGGAGCUUGGGAGAC - 74 |
| Evidence | not_experimental |
| Database links |
|
References
|
