Accession
MI0001988
Description
Danio rerio
dre-mir-130c-2 precursor miRNA
Gene family
MIPF0000034;
mir-130
Literature search
5 open access papers mention dre-mir-130c-2
(12 sentences)
(12 sentences)
Sequence
31650
reads,
1222
reads per million, 11 experiments
uuguugaccaggGCCCUUUUUCUGUUGUACUACUgugcagucagaugagCAGUGCAAUAUUAAAAGGGCAUuggcugacaa
.(((((.((((.((((((((..((((((...(((((.((......)).)))))))))))..)))))))).)))).))))).
.(((((.((((.((((((((..((((((...(((((.((......)).)))))))))))..)))))))).)))).))))).
Structure
u a g UC ACU g gu uguug ccag GCCCUUUU UGUUGU ACUgu ca c ||||| |||| |||||||| |||||| ||||| || acagu gguU CGGGAAAA AUAACG UGACg gu a a c A UU --- a ag
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chr5: 13288828-13288908 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from dre-mir-130c-2
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature dre-miR-130c-3p
| Accession | MIMAT0001828 |
| Description | Danio rerio dre-miR-130c-3p mature miRNA |
| Sequence | 50 - CAGUGCAAUAUUAAAAGGGCAU - 71 |
| Evidence |
experimental
cloned [1] |
| Database links |
|
| Predicted targets |
|
Mature dre-miR-130c-5p
| Accession | MIMAT0031969 |
| Description | Danio rerio dre-miR-130c-5p mature miRNA |
| Sequence | 13 - GCCCUUUUUCUGUUGUACUACU - 34 |
| Evidence | not_experimental |
References
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