Stem-loop dre-mir-133a-2

Accession

MI0001992

Description

Danio rerio dre-mir-133a-2 precursor miRNA

Literature search

34 open access papers mention dre-mir-133a-2
(136 sentences)

Sequence

20632979 reads, 16679.0 reads per million, 273 experiments

aaugcuuugcuaaAGCUGGUAAAAUGGAACCAAAUCaacuguuuuauggaUUUGGUCCCCUUCAACCAGCUGUagcugugcauu
(((((...((((.(((((((..((.((.((((((((............)))))))).)).))..))))))).))))...)))))

Structure

     uuu    a       AA  U  A        aacug 
aaugc   gcua AGCUGGU  AA GG ACCAAAUC     u
|||||   |||| |||||||  || || ||||||||      
uuacg   cgaU UCGACCA  UU CC UGGUUUag     u
     ugu    G       AC  C  C        guauu 

Annotation confidence High

Genome context

chr23: 7172120-7172203 [-]

Mature dre-miR-133a-5p

• Accession: MIMAT0003404
• Description: Danio rerio dre-miR-133a-5p mature miRNA
• Sequence: 14 - AGCUGGUAAAAUGGAACCAAAUC - 36
• Evidence: experimental ; cloned [1]

Mature dre-miR-133a-3p

• Accession: MIMAT0001830
• Description: Danio rerio dre-miR-133a-3p mature miRNA
• Sequence: 51 - UUUGGUCCCCUUCAACCAGCUGU - 73
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 15937218
   The developmental miRNA profiles of zebrafish as determined by small RNA cloning
   "Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T"
   "Genes Dev (2005) 19:1288-1293