miRBase entry: dre-mir-135c-1

Stem-loop dre-mir-135c-1

Accession

MI0001996

Description

Danio rerio dre-mir-135c-1 precursor miRNA

Literature search

5 open access papers mention dre-mir-135c-1
(12 sentences)

Sequence

128 reads, 26 reads per million, 5 experiments

ugcuguguuuUAUGGCUUUCUAUUCCUAUGUGauuuucuucugccgugucacauaggguucaaagccauuggguacagag
..((((((((.((((((((....(((((((((((.............)))))))))))...)))))))).))))))))..

Structure

ug        U        CUAU           uuucu 
  cuguguuu AUGGCUUU    UCCUAUGUGau     u
  |||||||| ||||||||    |||||||||||     c
  gacauggg uaccgaaa    gggauacacug     u
ga        u        -cuu           ugccg

Annotation confidence Not enough data

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Genome context

chr11: 38175071-38175150 [-]

Database links

Mature dre-miR-135c

Accession	MIMAT0001833
Description	Danio rerio dre-miR-135c mature miRNA
Sequence	11 - UAUGGCUUUCUAUUCCUAUGUG - 32
Evidence	experimental cloned [1]
Database links
Predicted targets

References

PubMed ID: 15937218
The developmental miRNA profiles of zebrafish as determined by small RNA cloning
"Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T"
"Genes Dev (2005) 19:1288-1293