Stem-loop dre-mir-155

Accession

MI0002023

Description

Danio rerio dre-mir-155 precursor miRNA mir-155

Gene
family

RF00731; mir-155

Literature search

9 open access papers mention dre-mir-155
(47 sentences)

Sequence

1212 reads, 89 reads per million, 11 experiments

uggugcagguUUAAUGCUAAUCGUGAUAGGGGuuuagugcugaugaacaccuaugcuguuagcauuaaucuugcgcua
(((((((((.(((((((((((.((.(((((.(((((.......))))).))))))).))))))))))).)))))))))

Structure

         u           C  G     G     gu 
uggugcagg UUAAUGCUAAU GU AUAGG Guuua  g
||||||||| ||||||||||| || ||||| |||||  c
aucgcguuc aauuacgauug cg uaucc caagu  u
         u           u  -     a     ag 

Annotation confidence Not enough data

Genome context

chr1: 576444-576521 [+]

Mature dre-miR-155

• Accession: MIMAT0001851
• Description: Danio rerio dre-miR-155 mature miRNA
• Sequence: 11 - UUAAUGCUAAUCGUGAUAGGGG - 32
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 15937218
   The developmental miRNA profiles of zebrafish as determined by small RNA cloning
   "Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T"
   "Genes Dev (2005) 19:1288-1293