Stem-loop dre-mir-155

Accession

MI0002023

Description

Danio rerio dre-mir-155 precursor miRNA mir-155

Gene
family

RF00731; mir-155

Literature search

111 open access papers mention dre-mir-155
(331 sentences)

Sequence

34939 reads, 83.0 reads per million, 264 experiments

uggugcagguUUAAUGCUAAUCGUGAUAGGGGUUuagugcugaugaaCACCUAUGCUGUUAGCAUUAAUCuugcgcua
(((((((((.(((((((((((.((.(((((.(((((.......))))).))))))).))))))))))).)))))))))

Structure

         u           C  G     G     gu 
uggugcagg UUAAUGCUAAU GU AUAGG GUUua  g
||||||||| ||||||||||| || ||||| |||||  c
aucgcguuC AAUUACGAUUG CG UAUCC Caagu  u
         U           U  -     A     ag 

Annotation confidence High

Genome context

chr1: 576444-576521 [+]

Mature dre-miR-155-5p

• Accession: MIMAT0001851
• Description: Danio rerio dre-miR-155-5p mature miRNA
• Sequence: 11 - UUAAUGCUAAUCGUGAUAGGGGUU - 34
• Evidence: experimental ; cloned [1]

Mature dre-miR-155-3p

• Accession: MIMAT0052768
• Description: Danio rerio dre-miR-155-3p mature miRNA
• Sequence: 48 - CACCUAUGCUGUUAGCAUUAAUC - 70
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 15937218
   The developmental miRNA profiles of zebrafish as determined by small RNA cloning
   "Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T"
   "Genes Dev (2005) 19:1288-1293