Stem-loop dre-mir-184-1

Accession

MI0002026

Description

Danio rerio dre-mir-184-1 precursor miRNA

Literature search

5 open access papers mention dre-mir-184-1
(106 sentences)

Sequence

3966916 reads, 3999.0 reads per million, 270 experiments

gucgaacacgucUCCUUAUCACUUUUCCAGCCCAGcuauccauuuaguauucguUGGACGGAGAACUGAUAAGGGCaugugcccgau
((((..(((((.(((((((((.((((((.(.(((((................))))).))))))).))))))))).)))))..))))

Structure

    aa     c         C      A C     uauccau 
gucg  cacgu UCCUUAUCA UUUUCC G CCAGc       u
||||  ||||| ||||||||| |||||| | |||||        
uagc  gugua GGGAAUAGU AAGAGG C GGUug       u
    cc     C         C      - A     cuuauga 

Annotation confidence High

Genome context

chr18: 26203303-26203389 [-]

Mature dre-miR-184-5p

• Accession: MIMAT0060895
• Description: Danio rerio dre-miR-184-5p mature miRNA
• Sequence: 13 - UCCUUAUCACUUUUCCAGCCCAG - 35
• Evidence: not_experimental

Mature dre-miR-184-3p

• Accession: MIMAT0001853
• Description: Danio rerio dre-miR-184-3p mature miRNA
• Sequence: 55 - UGGACGGAGAACUGAUAAGGGC - 76
• Evidence: not_experimental

References

1. PubMed ID: 15937218
   The developmental miRNA profiles of zebrafish as determined by small RNA cloning
   "Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T"
   "Genes Dev (2005) 19:1288-1293