Stem-loop dre-mir-206-2

Accession

MI0002046

Description

Danio rerio dre-mir-206-2 precursor miRNA

Literature search

14 open access papers mention dre-mir-206-2
(189 sentences)

Sequence

4261169 reads, 3771.0 reads per million, 247 experiments

gaguuggcuguugcuuauugagacgACAUACUUCCUUAUAUCCCCAUAUucagaauuaaucuaUGGAAUGUAAGGAAGUGUGUGGcuucagugagaucucaucaucauc
..(.(((.((...(((((((((.(.((((((((((((((((..(((((.............))))).)))))))))))))))).).)))))))))....))))).)...

Structure

-ga u   c  -uug         a g                CC     Uucag 
   g ugg ug    cuuauugag c ACAUACUUCCUUAUAU  CCAUA     a
   | ||| ||    ||||||||| | ||||||||||||||||  |||||     a
   c acu ac    gagugacuu G UGUGUGAAGGAAUGUA  GGUau     u
cua u   -  ucua         c G                -A     cuaau 

Annotation confidence High

Genome context

chr17: 5967238-5967346 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from dre-mir-206-2

Mature dre-miR-206-2-5p

• Accession: MIMAT0052773
• Description: Danio rerio dre-miR-206-2-5p mature miRNA
• Sequence: 26 - ACAUACUUCCUUAUAUCCCCAUAU - 49
• Evidence: experimental ; cloned [1]

Mature dre-miR-206-2-3p

• Accession: MIMAT0001866
• Description: Danio rerio dre-miR-206-2-3p mature miRNA
• Sequence: 64 - UGGAAUGUAAGGAAGUGUGUGG - 85
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 15937218
   The developmental miRNA profiles of zebrafish as determined by small RNA cloning
   "Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T"
   "Genes Dev (2005) 19:1288-1293