Stem-loop dre-mir-365-1

Accession

MI0002068

Description

Danio rerio dre-mir-365-1 precursor miRNA

Literature search

2 open access papers mention dre-mir-365-1
(3 sentences)

Sequence

961 reads, 87 reads per million, 8 experiments

ccgcagggagaaugaggggcuuuugggggcacuuguguuucaguuucaccaucaUAAUGCCCCUAAAAAUCCUUAUugcucuugcacug
..((((((..((((((((..(((((((((((.(((((...............)))))))))))))))).))))))))..))))))....

Structure

--cc      ag        gc           c     uuucag 
    gcaggg  aaugaggg  uuuugggggca uugug      u
    ||||||  ||||||||  ||||||||||| |||||      u
    cguucu  uUAUUCCU  AAAAUCCCCGU AAUac      u
guca      cg        -A           -     uaccac 

Annotation confidence Low

Genome context

chr3: 43716827-43716915 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from dre-mir-365-1

References

1. PubMed ID: 15937218
   The developmental miRNA profiles of zebrafish as determined by small RNA cloning
   "Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T"
   "Genes Dev (2005) 19:1288-1293