Stem-loop dre-mir-459

Accession

MI0002180

Description

Danio rerio dre-mir-459 precursor miRNA mir-459

Gene
family

RF03354; mir-459

Literature search

3 open access papers mention dre-mir-459
(3 sentences)

Sequence

24 reads, 5 reads per million, 4 experiments

ccucuugcucUCAGUAACAAGGAUUCAUCCUGuugugguacucaaauccaaCAGGGAAUCUCUGUUACUGGGGuuaagguu
..(((((.(((((((((((.((((((..(((((((.(((......)))))))))))))))).))))))))))).)))))..

Structure

cc     c           A      AU       u   ac 
  ucuug ucUCAGUAACA GGAUUC  CCUGuug ggu  u
  ||||| ||||||||||| ||||||  ||||||| |||   
  ggaau GGGGUCAUUGU UCUAAG  GGACaac cua  c
uu     u           C      --       -   aa 

Annotation confidence Not enough data

Genome context

chr1: 1575483-1575563 [+]

Mature dre-miR-459-5p

• Accession: MIMAT0001886
• Description: Danio rerio dre-miR-459-5p mature miRNA
• Sequence: 11 - UCAGUAACAAGGAUUCAUCCUG - 32
• Evidence: experimental ; cloned [1]

Mature dre-miR-459-3p

• Accession: MIMAT0003408
• Description: Danio rerio dre-miR-459-3p mature miRNA
• Sequence: 52 - CAGGGAAUCUCUGUUACUGGGG - 73
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 15937218
   The developmental miRNA profiles of zebrafish as determined by small RNA cloning
   "Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T"
   "Genes Dev (2005) 19:1288-1293