Accession
MI0002233
Description
Populus trichocarpa
ptc-MIR166p precursor miRNA
Gene family
MIPF0000004;
MIR166
Literature search
6 open access papers mention ptc-MIR166p
(23 sentences)
(23 sentences)
Sequence
uaagguugagaggaacgcugucugggucgaggucauggaggccaugauuauacauaaauggcauuaucugaugacagcccagauaaucgaugcaccugucuugaaccuaaaugauucUCGGACCAGGCUCCAUUCCUUccaaccau
...(((((.((((((.(..((((((..(((((((((..(((((((............))))).(((((((.........)))))))((((.((....)).))))..))..)))).)))))..))))))..).)))))).)))))..
...(((((.((((((.(..((((((..(((((((((..(((((((............))))).(((((((.........)))))))((((.((....)).))))..))..)))).)))))..))))))..).)))))).)))))..
Structure
uaa a c cu gu - gg gccaugauuauacauaaauggca aug gguug gaggaa g gucugg cgagg ucau ag uuaucug a ||||| |||||| | |||||| ||||| |||| || ||||||| c ccaac UUCCUU C CGGACC GCUcu agua uc aauagac a -ua c A CU AG u aa ---caaguucuguccacguagcu ccg
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
CM000341.2: 4841446-4841591 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from ptc-MIR166p
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ptc-miR166p
| Accession | MIMAT0001939 |
| Description | Populus trichocarpa ptc-miR166p mature miRNA |
| Sequence | 118 - UCGGACCAGGCUCCAUUCCUU - 138 |
| Evidence | not_experimental |
References
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