Accession
MI0002408
Description
Arabidopsis thaliana
ath-MIR447b precursor miRNA MIR447
Gene
family?
family?
RF04149;
MIR447
Literature search
3 open access papers mention ath-MIR447b
(17 sentences)
(17 sentences)
Sequence
cauucuuaauauacaauacuacuuuuucauccauuaauccccuuacaaugucgaguaaacgaagcaucuguccccugguauugucuucgagcuugguguguuuuucuagccagccccaaguucucgaguugaucauuguuuguauucugacacauuauUUGGGGACGAGAUGUUUUGUUGacucgauauaagaaggggcuuuauggaagaaauuguaguauuauauauugagaaug
(((((((((((((.((((((((..((((.(((((.((.((((((...(((((((((.((((((((((((((((((.((((.(((.(((((((((((.(((((.....)))..)).)))))..)))))).........(((........)))))).)))).)))))).)))))))))))).)))))))))...)))))).)).))))).))))..)))))))).)))))))))))))
(((((((((((((.((((((((..((((.(((((.((.((((((...(((((((((.((((((((((((((((((.((((.(((.(((((((((((.(((((.....)))..)).)))))..)))))).........(((........)))))).)))).)))))).)))))))))))).)))))))))...)))))).)).))))).))))..)))))))).)))))))))))))
Structure
c uu a u u aca a - u u ----------------------c -- u -- u
cauucuuaauaua aauacuac uuuc uccau aa ccccuu augucgagu aacgaagcaucu gucccc ggua ugu uucgag cuugg gu guu u
||||||||||||| |||||||| |||| ||||| || |||||| ||||||||| |||||||||||| |||||| |||| ||| |||||| ||||| || ||| u
guaagaguuauau uuaugaug aaag aggua uu ggggaa uauagcuca UUGUUUUGUAGA CAGGGG Uuau aca gagcuc gaacc cg cga c
a uu a u c gaa G G U u cagucuuauguuuguuacuaguu uu c ac u
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
chr4: 1535426-1535661 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from ath-MIR447b
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ath-miR447b
| Accession | MIMAT0002114 |
| Description | Arabidopsis thaliana ath-miR447b mature miRNA |
| Sequence | 159 - UUGGGGACGAGAUGUUUUGUUG - 180 |
| Evidence |
experimental
cloned [1-2], 5'RACE [2], 454 [3], Illumina [4] |
References
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