Stem-loop ssc-mir-323

Accession

MI0002433

Description

Sus scrofa ssc-mir-323 precursor miRNA

Literature search

7 open access papers mention ssc-mir-323
(11 sentences)

Sequence

1 reads, 2 reads per million, 1 experiments

uugguacuuggagagaggugguccguggcgcguucgcuuuauuuauggcGCACAUUACACGGUCGACCUCUuugcgguaucuaauc
..((((((.(.((((((((.(.(((((..(.((.((((........)))).)).)..))))).).)))))))).))))))).....

Structure

---uu      u g        g u     gc c  u    uua 
     gguacu g agagaggu g ccgug  g gu cgcu   u
     |||||| | |||||||| | |||||  | || ||||    
     cuaugg c uuUCUCCA C GGCAC  U CA Gcgg   u
cuaau      - g        G U     AU A  C    uau 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssc-miR-323

• Accession: MIMAT0002139
• Description: Sus scrofa ssc-miR-323 mature miRNA
• Sequence: 50 - GCACAUUACACGGUCGACCUCU - 71
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 15885146
   Pigs in sequence space: a 0.66X coverage pig genome survey based on shotgun sequencing
   "Wernersson R, Schierup MH, Jorgensen FG, Gorodkin J, Panitz F, Staerfeldt HH, Christensen OF, Mailund T, Hornshoj H, Klein A, Wang J, Liu B, Hu S, Dong W, Li W, Wong GK, Yu J, Wang J, Bendixen C, Fredholm M, Brunak S, Yang H, Bolund L"
   "BMC Genomics (2005) 6:70


2. PubMed ID: 24499489
   Exploration of microRNAs in porcine milk exosomes
   Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
   BMC Genomics (2014) 15:100