Stem-loop ssc-mir-326

Accession

MI0002434

Description

Sus scrofa ssc-mir-326 precursor miRNA

Literature search

13 open access papers mention ssc-mir-326
(14 sentences)

Sequence

102579 reads, 80.0 reads per million, 193 experiments

ucugucuguugggcUGGAGGCAGGGCCUUUGUGCAGgcggguugugcucagaucgCCUCUGGGCCCUUCCUCCAGcccagaggcggauuca
(((((((.((((((((((((.(((((((......((((((.(((....))).))))))..))))))).)))))))))))))))))))....

Structure

----       g            C       UUGUGC      g   u 
    ucugucu uugggcUGGAGG AGGGCCU      AGgcgg uug g
    ||||||| |||||||||||| |||||||      |||||| |||  
    aggcgga gacccGACCUCC UCCCGGG      UCCgcu gac c
acuu       -            U       ----UC      a   u 

Annotation confidence High

Genome context

chr9: 10800191-10800281 [-]

Mature ssc-miR-326-5p

• Accession: MIMAT0052564
• Description: Sus scrofa ssc-miR-326-5p mature miRNA
• Sequence: 15 - UGGAGGCAGGGCCUUUGUGCAG - 36
• Evidence: experimental ; Illumina [2]

Mature ssc-miR-326-3p

• Accession: MIMAT0002140
• Description: Sus scrofa ssc-miR-326-3p mature miRNA
• Sequence: 56 - CCUCUGGGCCCUUCCUCCAG - 75
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 15885146
   Pigs in sequence space: a 0.66X coverage pig genome survey based on shotgun sequencing
   "Wernersson R, Schierup MH, Jorgensen FG, Gorodkin J, Panitz F, Staerfeldt HH, Christensen OF, Mailund T, Hornshoj H, Klein A, Wang J, Liu B, Hu S, Dong W, Li W, Wong GK, Yu J, Wang J, Bendixen C, Fredholm M, Brunak S, Yang H, Bolund L"
   "BMC Genomics (2005) 6:70


2. PubMed ID: 24499489
   Exploration of microRNAs in porcine milk exosomes
   Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
   BMC Genomics (2014) 15:100