Accession
MI0002442
Description
Sus scrofa
ssc-mir-27a precursor miRNA
Literature search
62 open access papers mention ssc-mir-27a
(139 sentences)
(139 sentences)
Sequence
21341994
reads,
13856.0
reads per million, 214 experiments
uggccuggggagcAGGGCUUAGCUGCUUGUGAGCAgguccacagcaagucgugUUCACAGUGGCUAAGUUCCGCccccugga
...((.((((.((.(((((((((((((.(((((((.(.(........).).)))))))))))))))))))).)))))).)).
...((.((((.((.(((((((((((((.(((((((.(.(........).).)))))))))))))))))))).)))))).)).
Structure
ugg u a A U g u cac cc gggg gc GGGCUUAGCUGCU GUGAGCA g c a || |||| || ||||||||||||| ||||||| | | gg cccc CG CUUGAAUCGGUGA CACUUgu c g g --a u - C - g u aac
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chr2: 65582015-65582096 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from ssc-mir-27a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ssc-miR-27a-5p
| Accession | MIMAT0052570 |
| Description | Sus scrofa ssc-miR-27a-5p mature miRNA |
| Sequence | 14 - AGGGCUUAGCUGCUUGUGAGCA - 35 |
| Evidence |
experimental
cloned [2], Illumina [3-4] |
Mature ssc-miR-27a-3p
| Accession | MIMAT0002148 |
| Description | Sus scrofa ssc-miR-27a-3p mature miRNA |
| Sequence | 54 - UUCACAGUGGCUAAGUUCCGC - 74 |
| Evidence |
experimental
cloned [2], Illumina [3-4] |
References
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