miRBase entry: mne-mir-125b-1

Stem-loop mne-mir-125b-1


Accession
MI0002517
Description
Macaca nemestrina mne-mir-125b-1 precursor miRNA


Sequence


ugcgcuccucucagUCCCUGAGACCCUAACUUGUGAuguuuaccguuuaaauccacggguuaggcucuugggagcugcgagucgugcu
.((((..(((.((((.(((((((.(((((((((((..(((((.....))))).))))))))))).))))))).)))).)))..)))).

Structure
u    uc   u    C       C           Au     c 
 gcgc  cuc cagU CCUGAGA CCUAACUUGUG  guuua c
 ||||  ||| |||| ||||||| |||||||||||  ||||| g
 cgug  gag gucg ggguucu ggauugggcac  uaaau u
u    cu   c    a       c           -c     u 


Annotation confidence Low
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
Unknown

Database links

Mature mne-miR-125b

Accession MIMAT0002228
Description Macaca nemestrina mne-miR-125b mature miRNA
Sequence 15 - UCCCUGAGACCCUAACUUGUGA - 36
Evidence not_experimental

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24