Stem-loop ppa-mir-128

Accession

MI0002523

Description

Pan paniscus ppa-mir-128 precursor miRNA

Sequence

ugagcuguuggauucggggccguagcacugucugagagguuuacauuucUCACAGUGAACCGGUCUCUUUUucagcugcuuc
.((((.((((((...(((((((...((((((..(((((((....)))))))))))))...)))))))...)))))).)))).

Structure

u    u      uuc       uag      cu       u 
 gagc guugga   ggggccg   cacugu  gagaggu u
 |||| ||||||   |||||||   ||||||  |||||||  
 uucg cgacuU   CUCUGGC   GUGACA  CUcuuua a
c    u      UUU       CAA      --       c 

Annotation confidence Low

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

chr2B: 139733695-139733776 [+]

Mature ppa-miR-128

• Accession: MIMAT0002234
• Description: Pan paniscus ppa-miR-128 mature miRNA
• Sequence: 50 - UCACAGUGAACCGGUCUCUUUU - 71
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24