Stem-loop mml-mir-133a

Accession

MI0002533

Description

Macaca mulatta mml-mir-133a precursor miRNA

Literature search

8 open access papers mention mml-mir-133a
(22 sentences)

Sequence

6724107 reads, 13437.0 reads per million, 121 experiments

acaaugcuuugcuagAGCUGGUAAAAUGGAACCAAAUcgccucuucaauggaUUUGGUCCCCUUCAACCAGCUGUagcuaugcauuga
.((((((...((((.(((((((..((.((.((((((((............)))))))).)).))..))))))).))))...)))))).

Structure

a      uuu    g       AA  U  A        gccuc 
 caaugc   gcua AGCUGGU  AA GG ACCAAAUc     u
 ||||||   |||| |||||||  || || ||||||||      
 guuacg   cgaU UCGACCA  UU CC UGGUUUag     u
a      uau    G       AC  C  C        guaac 

Annotation confidence High

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

18: 60579195-60579282 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mml-mir-133a

Mature mml-miR-133a-5p

• Accession: MIMAT0061157
• Description: Macaca mulatta mml-miR-133a-5p mature miRNA
• Sequence: 16 - AGCUGGUAAAAUGGAACCAAAU - 37
• Evidence: not_experimental

Mature mml-miR-133a-3p

• Accession: MIMAT0002244
• Description: Macaca mulatta mml-miR-133a-3p mature miRNA
• Sequence: 53 - UUUGGUCCCCUUCAACCAGCUGU - 75
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24