miRBase entry: mml-mir-133a

Stem-loop mml-mir-133a

Accession

MI0002533

Description

Macaca mulatta mml-mir-133a precursor miRNA

Literature search

1 open access papers mention mml-mir-133a
(1 sentences)

Sequence

23465 reads, 185 reads per million, 9 experiments

acaaugcuuugcuagagcugguaaaauggaaccaaaucgccucuucaauggauUUGGUCCCCUUCAACCAGCUGuagcuaugcauuga
.((((((...((((.(((((((..((.((.((((((((............)))))))).)).))..))))))).))))...)))))).

Structure

a      uuu    g       aa  u  a        gccuc 
 caaugc   gcua agcuggu  aa gg accaaauc     u
 ||||||   |||| |||||||  || || ||||||||      
 guuacg   cgau UCGACCA  UU CC UGGUUuag     u
a      uau    G       AC  C  C        guaac

Annotation confidence High

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Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

chr18: 10280933-10281020 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mml-mir-133a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mml-miR-133a

Accession	MIMAT0002244
Description	Macaca mulatta mml-miR-133a mature miRNA
Sequence	54 - UUGGUCCCCUUCAACCAGCUG - 74
Evidence	not_experimental

References

PubMed ID: 15652478
Phylogenetic shadowing and computational identification of human microRNA genes
"Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
"Cell (2005) 120:21-24