Stem-loop sla-mir-133a

Accession

MI0002534

Description

Saguinus labiatus sla-mir-133a precursor miRNA

Sequence

acaaugcuuugcuagagcugguaaaauggaaccaaaucgccucuucaauggauUUGGUCCCCUUCAACCAGCUGUagcuaugcauuga
.((((((...((((.(((((((..((.((.((((((((............)))))))).)).))..))))))).))))...)))))).

Structure

a      uuu    g       aa  u  a        gccuc 
 caaugc   gcua agcuggu  aa gg accaaauc     u
 ||||||   |||| |||||||  || || ||||||||      
 guuacg   cgaU UCGACCA  UU CC UGGUUuag     u
a      uau    G       AC  C  C        guaac 

Annotation confidence Not enough data

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

Unknown

Mature sla-miR-133a

• Accession: MIMAT0002245
• Description: Saguinus labiatus sla-miR-133a mature miRNA
• Sequence: 54 - UUGGUCCCCUUCAACCAGCUGU - 75
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24