Stem-loop lla-mir-135-2

Accession

MI0002544

Description

Lagothrix lagotricha lla-mir-135-2 precursor miRNA

Sequence

agauaaauucacucuagugcuuUAUGGCUUUUUAUUCCUAUGUGAuaguaauaaagucucauguagggauggaagccaugcaccacauaauguaaaauca
................((((...(((((((((.((((((((((((.(.(.....).).))))))))))))))))))))))))).................

Structure

-agauaaauucacucua    uuU         U            u g a 
                 gugc   AUGGCUUUU AUUCCUAUGUGA a u a
                 ||||   ||||||||| |||||||||||| | | u
                 cacg   uaccgaagg uagggauguacu u a a
acuaaaauguaauacac    ---         -            c g a 

Annotation confidence Low

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

Unknown

Mature lla-miR-135

• Accession: MIMAT0002248
• Description: Lagothrix lagotricha lla-miR-135 mature miRNA
• Sequence: 23 - UAUGGCUUUUUAUUCCUAUGUGA - 45
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24