Accession
MI0002549
Description
Pan troglodytes
ptr-mir-143 precursor miRNA
Literature search
1 open access papers mention ptr-mir-143
(1 sentences)
(1 sentences)
Sequence
gcgcagcgcccugucucccagccugaggugcagugcugcaucucuggucaguugggagucUGAGAUGAAGCACUGUAGCUCAggaagagagaaguuuuucugcagc
((((((.......((((.(..((((((.(((((((((.((((((.((((......)).)).)))))).))))))))).))))))..).)))).......)))).))
((((((.......((((.(..((((((.(((((((((.((((((.((((......)).)).)))))).))))))))).))))))..).)))).......)))).))
Structure
- cgcccug c ag g g u - ag gc gcag ucuc c ccugag ugcagugcu caucuc gg uc u || |||| |||| | |||||| ||||||||| |||||| || || cg cguc agag g ggACUC AUGUCACGA GUAGAG cu ag u a uuuuuga a aa G A U g gg
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.
Genome context
chr5: 149628986-149629091 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ptr-mir-143
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ptr-miR-143
| Accession | MIMAT0002257 |
| Description | Pan troglodytes ptr-miR-143 mature miRNA |
| Sequence | 61 - UGAGAUGAAGCACUGUAGCUCA - 82 |
| Evidence | not_experimental |
References
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