Accession
MI0002549
Description
Pan troglodytes
ptr-mir-143 precursor miRNA
Literature search
1 open access papers mention ptr-mir-143
(1 sentences)
(1 sentences)
Sequence
gcgcagcgcccugucucccagccugaggugcagugcugcaucucuggucaguugggagucUGAGAUGAAGCACUGUAGCUCAggaagagagaaguuuuucugcagc
((((((.......((((.(..((((((.(((((((((.((((((.((((......)).)).)))))).))))))))).))))))..).)))).......)))).))
((((((.......((((.(..((((((.(((((((((.((((((.((((......)).)).)))))).))))))))).))))))..).)))).......)))).))
Structure
- cgcccug c ag g g u - ag gc gcag ucuc c ccugag ugcagugcu caucuc gg uc u || |||| |||| | |||||| ||||||||| |||||| || || cg cguc agag g ggACUC AUGUCACGA GUAGAG cu ag u a uuuuuga a aa G A U g gg
Annotation confidence
Low
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.
Genome context
chr5: 149628986-149629091 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ptr-mir-143
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ptr-miR-143
| Accession | MIMAT0002257 |
| Description | Pan troglodytes ptr-miR-143 mature miRNA |
| Sequence | 61 - UGAGAUGAAGCACUGUAGCUCA - 82 |
| Evidence | not_experimental |
References
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