miRBase entry: lla-mir-143

Stem-loop lla-mir-143


Accession
MI0002552
Description
Lagothrix lagotricha lla-mir-143 precursor miRNA


Sequence


gcgcagcgcccugucucccagccugaggugcagugcugcaucucuggucaguugggagucUGAGAUGAAGCACUGUAGCUCAggaagagagaaguuguucugcagc
((((((.((....((((.(..((((((.(((((((((.((((((.((((......)).)).)))))).))))))))).))))))..).))))....)).)))).))

Structure
  -    c  ccug    c ag      g         g      u  -  ag 
gc gcag gc    ucuc c  ccugag ugcagugcu caucuc gg uc  u
|| |||| ||    |||| |  |||||| ||||||||| |||||| || ||   
cg cguc ug    agag g  ggACUC AUGUCACGA GUAGAG cu ag  u
  a    u  uuga    a aa      G         A      U  g  gg 


Annotation confidence Low
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
Unknown

Database links

Mature lla-miR-143

Accession MIMAT0002260
Description Lagothrix lagotricha lla-miR-143 mature miRNA
Sequence 61 - UGAGAUGAAGCACUGUAGCUCA - 82
Evidence not_experimental

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24