miRBase entry: mne-mir-153-1

Stem-loop mne-mir-153-1


Accession
MI0002565
Description
Macaca nemestrina mne-mir-153-1 precursor miRNA


Sequence


cucacagcugccagugucauuuuugugaucugcagcuaguauucucacuccagUUGCAUAGUCACAAAAGUGAucauuggcagguguggc
.(((((.((((((((((((((((((((((.((((((((((......)))..)))))))..))))))))))))).))))))))).))))).

Structure
c     g         -             -c       --   au 
 ucaca cugccagug ucauuuuugugau  ugcagcu  agu  u
 ||||| ||||||||| |||||||||||||  |||||||  |||   
 ggugu gacgguuac AGUGAAAACACUG  ACGUUga  uca  c
c     g         u             AU       cc   cu 


Annotation confidence Low
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
Unknown

Database links

Mature mne-miR-153

Accession MIMAT0002273
Description Macaca nemestrina mne-miR-153 mature miRNA
Sequence 54 - UUGCAUAGUCACAAAAGUGA - 73
Evidence not_experimental

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24