miRBase entry: ggo-mir-153

Stem-loop ggo-mir-153


Accession
MI0002567
Description
Gorilla gorilla ggo-mir-153 precursor miRNA


Sequence


agcgguggccagugucauuuuugugauguugcagcuaguaauaugagcccagUUGCAUAGUCACAAAAGUGAucauuggaaacugug
.(((((..(((((((((((((((((((..(((((((.((.......))..)))))))..))))))))))))).))))))..))))).

Structure
a     gg      -             gu       -a  aa 
 gcggu  ccagug ucauuuuugugau  ugcagcu  gu  u
 |||||  |||||| |||||||||||||  |||||||  ||  a
 uguca  gguuac AGUGAAAACACUG  ACGUUga  cg  u
g     aa      u             AU       cc  ag 


Annotation confidence Low
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Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
chr7: 157377179-157377265 [-]

Database links

Mature ggo-miR-153

Accession MIMAT0002274
Description Gorilla gorilla ggo-miR-153 mature miRNA
Sequence 53 - UUGCAUAGUCACAAAAGUGA - 72
Evidence not_experimental

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24