Accession
MI0002597
Description
Pan troglodytes
ptr-mir-154 precursor miRNA
Literature search
1 open access papers mention ptr-mir-154
(1 sentences)
(1 sentences)
Sequence
gugguacuugaagaUAGGUUAUCCGUGUUGCCUUCGcuuuauuugugacgaaucauacacgguugaccuauuuuucaguaccaa
.(((((((.((((((((((((.((((((((.(.((((.......)))).)...)).)))))).)))))))))))).))))))).
.(((((((.((((((((((((.((((((((.(.((((.......)))).)...)).)))))).)))))))))))).))))))).
Structure
g u U - --C U uu ugguacu gaagaUAGGUUA CCGUGU UG C UCGc u ||||||| |||||||||||| |||||| || | |||| a accauga uuuuuauccagu ggcaca ac g agug u a c u u uaa c uu
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.
Genome context
chr14: 86308003-86308086 [+]
Clustered miRNAs
13 other miRNAs are < 10 kb from ptr-mir-154
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ptr-miR-154
| Accession | MIMAT0002296 |
| Description | Pan troglodytes ptr-miR-154 mature miRNA |
| Sequence | 15 - UAGGUUAUCCGUGUUGCCUUCG - 36 |
| Evidence | not_experimental |
References
|
