Stem-loop mne-mir-154

Accession

MI0002600

Description

Macaca nemestrina mne-mir-154 precursor miRNA

Sequence

gagguacuugaagaUAGGUUAUCCGUGUUGCCUUCGcuuuauuugugacgaaucauacacgguugaccuauuuuucaguaccaa
..((((((.((((((((((((.((((((((.(.((((.......)))).)...)).)))))).)))))))))))).))))))..

Structure

ga      u            U      -  --C U    uu 
  gguacu gaagaUAGGUUA CCGUGU UG   C UCGc  u
  |||||| |||||||||||| |||||| ||   | ||||  a
  ccauga uuuuuauccagu ggcaca ac   g agug  u
aa      c            u      u  uaa c    uu 

Annotation confidence Not enough data

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

Unknown

Mature mne-miR-154

• Accession: MIMAT0002299
• Description: Macaca nemestrina mne-miR-154 mature miRNA
• Sequence: 15 - UAGGUUAUCCGUGUUGCCUUCG - 36
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24