miRBase entry: mne-mir-154

Stem-loop mne-mir-154


Accession
MI0002600
Description
Macaca nemestrina mne-mir-154 precursor miRNA


Sequence


gagguacuugaagaUAGGUUAUCCGUGUUGCCUUCGcuuuauuugugacgaaucauacacgguugaccuauuuuucaguaccaa
..((((((.((((((((((((.((((((((.(.((((.......)))).)...)).)))))).)))))))))))).))))))..

Structure
ga      u            U      -  --C U    uu 
  gguacu gaagaUAGGUUA CCGUGU UG   C UCGc  u
  |||||| |||||||||||| |||||| ||   | ||||  a
  ccauga uuuuuauccagu ggcaca ac   g agug  u
aa      c            u      u  uaa c    uu 


Annotation confidence Low
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
Unknown

Database links

Mature mne-miR-154

Accession MIMAT0002299
Description Macaca nemestrina mne-miR-154 mature miRNA
Sequence 15 - UAGGUUAUCCGUGUUGCCUUCG - 36
Evidence not_experimental

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24