Stem-loop ptr-mir-184

Accession

MI0002602

Description

Pan troglodytes ptr-mir-184 precursor miRNA

Literature search

1 open access papers mention ptr-mir-184
(14 sentences)

Sequence

ccagucacguccccuuaucacuuuuccagcccagcuuugugacuguaaguguUGGACGGAGAACUGAUAAGGGUaggugauuga
.(((((((.(.(((((((((.((((((.(.(((((((((......)))).))))).))))))).))))))))).).))))))).

Structure

c       g c         c      a c     -    ug 
 cagucac u cccuuauca uuuucc g ccagc uuug  a
 ||||||| | ||||||||| |||||| | ||||| ||||   
 guuagug a GGGAAUAGU AAGAGG C GGUug gaau  c
a       g U         C      - A     u    gu 

Annotation confidence Not enough data

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

chr15: 60305431-60305514 [+]

Mature ptr-miR-184

• Accession: MIMAT0002301
• Description: Pan troglodytes ptr-miR-184 mature miRNA
• Sequence: 53 - UGGACGGAGAACUGAUAAGGGU - 74
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24