Stem-loop ptr-mir-186

Accession

MI0002605

Description

Pan troglodytes ptr-mir-186 precursor miRNA

Sequence

ugcuuguaacuuucCAAAGAAUUCUCCUUUUGGGCUUucugguuuuauuuuaagcccaaaggugaauuuuuugggaaguuugagcu
.(((((.(((((((((((((((((.(((((.((((((..............))))))))))).)))))))))))))))))))))).

Structure

u     u                 U     U      ucuggu 
 gcuug aacuuucCAAAGAAUUC CCUUU GGGCUU      u
 ||||| ||||||||||||||||| ||||| ||||||       
 cgagu uugaaggguuuuuuaag ggaaa cccgaa      u
u     -                 u     -      uuuuau 

Annotation confidence Not enough data

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

chr1: 71113835-71113920 [-]

Mature ptr-miR-186

• Accession: MIMAT0002304
• Description: Pan troglodytes ptr-miR-186 mature miRNA
• Sequence: 15 - CAAAGAAUUCUCCUUUUGGGCUU - 37
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24