miRBase entry: mne-mir-188

Stem-loop mne-mir-188


Accession
MI0002611
Description
Macaca nemestrina mne-mir-188 precursor miRNA


Sequence


ugcucccucucucaCAUCCCUUGCAUGGUGGAGGGUgagcuuuaugaaaaccccucccacaugcaggguuugcaggauggugagcc
.((((((..(((..((..(((((((((..((((((....(.....).....))))))..)))))))))..))..))).)).)))).

Structure
u    -  uc   ca  UC         GU      -Ugag u 
 gcuc cc  ucu  CA  CCUUGCAUG  GGAGGG     c u
 |||| ||  |||  ||  |||||||||  ||||||     | u
 cgag gg  agg  gu  gggacguac  ccuccc     g a
c    u  -u   ac  uu         ac      caaaa u 


Annotation confidence Low
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
Unknown

Database links

Mature mne-miR-188

Accession MIMAT0002310
Description Macaca nemestrina mne-miR-188 mature miRNA
Sequence 15 - CAUCCCUUGCAUGGUGGAGGGU - 36
Evidence not_experimental

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24