Accession
MI0002614
Description
Pan troglodytes
ptr-mir-190a precursor miRNA
Sequence
323
reads,
4.0
reads per million, 15 experiments
ugcaggccucugugUGAUAUGUUUGAUAUAUUAGGUUguuauuuaauccaACUAUAUAUCAAACAUAUUCCUacagugucuugcc
.(((((.(.(((((.((((((((((((((((..(((((..........)))))))))))))))))))))..))))).).))))).
.(((((.(.(((((.((((((((((((((((..(((((..........)))))))))))))))))))))..))))).).))))).
Structure
u c u -U UA uuau gcagg c cugug GAUAUGUUUGAUAUAU GGUUg u ||||| | ||||| |||||||||||||||| ||||| cguuc g gacaU UUAUACAAACUAUAUA UCAac u c u u CC -- cuaa
Annotation confidence
High
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.
Genome context
chr15: 43647788-43647872 [+]
Database links
Mature ptr-miR-190a-5p
| Accession | MIMAT0002313 |
| Description | Pan troglodytes ptr-miR-190a-5p mature miRNA |
| Sequence | 15 - UGAUAUGUUUGAUAUAUUAGGUU - 37 |
| Evidence | not_experimental |
Mature ptr-miR-190a-3p
| Accession | MIMAT0052204 |
| Description | Pan troglodytes ptr-miR-190a-3p mature miRNA |
| Sequence | 51 - ACUAUAUAUCAAACAUAUUCCU - 72 |
| Evidence | not_experimental |
References
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