miRBase entry: ggo-mir-195

Stem-loop ggo-mir-195

Accession

MI0002617

Description

Gorilla gorilla ggo-mir-195 precursor miRNA

Literature search

1 open access papers mention ggo-mir-195
(7 sentences)

Sequence

agcuucccuggcucUAGCAGCACAGAAAUAUUGGCacagggaagcgagucugccaauauuggcugugcugcuccaggcaggguggug
.(((.(((((.((..((((((((((.((((((((((..((........))))))))))))..))))))))))..)).))))).))).

Structure

a   u     g  cU          -A          ca  gaa 
 gcu cccug cu  AGCAGCACAG  AAUAUUGGCa  gg   g
 ||| ||||| ||  ||||||||||  ||||||||||  ||    
 ugg gggac ga  ucgucguguc  uuauaaccgu  cu   c
g   u     g  cc          gg          --  gag

Annotation confidence Not enough data

Do you think this miRNA is real?

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

chr17: 7023321-7023407 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from ggo-mir-195

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ggo-miR-195

Accession	MIMAT0002316
Description	Gorilla gorilla ggo-miR-195 mature miRNA
Sequence	15 - UAGCAGCACAGAAAUAUUGGC - 35
Evidence	not_experimental

References

PubMed ID: 15652478
Phylogenetic shadowing and computational identification of human microRNA genes
"Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
"Cell (2005) 120:21-24