miRBase entry: ppa-mir-29a

Stem-loop ppa-mir-29a

Accession

MI0002659

Description

Pan paniscus ppa-mir-29a precursor miRNA

Sequence

augacugauuucuuuugguguucagagucaauauaauuuuCUAGCACCAUCUGAAAUCGGUUau
((((((((((((...(((((((.((((...........)))))))))))...))))))))))))

Structure

            uuu       c    ucaa 
augacugauuuc   ugguguu agag    u
||||||||||||   ||||||| ||||    a
uaUUGGCUAAAG   ACCACGA UCuu    u
            UCU       -    uuaa

Annotation confidence Not enough data

Do you think this miRNA is real?

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

chr7: 135357867-135357930 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from ppa-mir-29a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ppa-miR-29a

Accession	MIMAT0002362
Description	Pan paniscus ppa-miR-29a mature miRNA
Sequence	41 - CUAGCACCAUCUGAAAUCGGUU - 62
Evidence	not_experimental

References

PubMed ID: 15652478
Phylogenetic shadowing and computational identification of human microRNA genes
"Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
"Cell (2005) 120:21-24