Stem-loop mml-mir-33a

Accession

MI0002684

Description

Macaca mulatta mml-mir-33a precursor miRNA

Literature search

1 open access papers mention mml-mir-33a
(1 sentences)

Sequence

47744 reads, 36.0 reads per million, 128 experiments

cugcgGUGCAUUGUAGUUGCAUUGCAUguucuggugguacccaugCAAUGUUUCCACAGUGCAUUAcag
(((.((((((((((.(..((((((((((....(((...)))))))))))))..).)))))))))).)))

Structure

   c          A UU          uucu   g 
cug gGUGCAUUGU G  GCAUUGCAUg    ggu  
||| |||||||||| |  ||||||||||    ||| g
gac UUACGUGACA C  UGUAACguac    cca  
   A          C UU          ----   u 

Annotation confidence High

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [2]. The expression of this mature miRNA was validated by Miska et al [1].

Genome context

10: 9605775-9605843 [-]

Mature mml-miR-33a-5p

• Accession: MIMAT0002392
• Description: Macaca mulatta mml-miR-33a-5p mature miRNA
• Sequence: 6 - GUGCAUUGUAGUUGCAUUGCAU - 27
• Evidence: experimental ; cloned [1]

Mature mml-miR-33a-3p

• Accession: MIMAT0061159
• Description: Macaca mulatta mml-miR-33a-3p mature miRNA
• Sequence: 46 - CAAUGUUUCCACAGUGCAUUA - 66
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 15345052
   Microarray analysis of microRNA expression in the developing mammalian brain
   Miska EA, Alvarez-Saavedra E, Townsend M, Yoshii A, Sestan N, Rakic P, Constantine-Paton M, Horvitz HR
   Genome Biol (2004) 5:R68


2. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24