Stem-loop ggo-mir-33

Accession

MI0002686

Description

Gorilla gorilla ggo-mir-33 precursor miRNA

Sequence

1497 reads, 113.0 reads per million, 4 experiments

cugugGUGCAUUGUAGUUGCAUUGCAuguucuggugguacccaugCAAUGUUUCCACAGUGCAUCAcag
((((((((((((((.(..((((((((((....(((...)))))))))))))..).))))))))))))))

Structure

              A UU          uucu   g 
cugugGUGCAUUGU G  GCAUUGCAug    ggu  
|||||||||||||| |  ||||||||||    ||| g
gacACUACGUGACA C  UGUAACguac    cca  
              C UU          ----   u 

Annotation confidence High

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

chr22: 25442467-25442535 [+]

Mature ggo-miR-33-5p

• Accession: MIMAT0002394
• Description: Gorilla gorilla ggo-miR-33-5p mature miRNA
• Sequence: 6 - GUGCAUUGUAGUUGCAUUGCA - 26
• Evidence: not_experimental

Mature ggo-miR-33-3p

• Accession: MIMAT0061253
• Description: Gorilla gorilla ggo-miR-33-3p mature miRNA
• Sequence: 46 - CAAUGUUUCCACAGUGCAUCA - 66
• Evidence: experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24