Stem-loop ppa-mir-33

Accession

MI0002689

Description

Pan paniscus ppa-mir-33 precursor miRNA

Sequence

cugugGUGCAUUGUAGUUGCAUUGcauguucuggugguacccaugcaauguuuccacagugcaucacag
((((((((((((((.(..((((((((((....(((...)))))))))))))..).))))))))))))))

Structure

              A UU          uucu   g 
cugugGUGCAUUGU G  GCAUUGcaug    ggu  
|||||||||||||| |  ||||||||||    ||| g
gacacuacgugaca c  uguaacguac    cca  
              c uu          ----   u 

Annotation confidence Not enough data

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

chr22: 40878595-40878663 [+]

Mature ppa-miR-33

• Accession: MIMAT0002397
• Description: Pan paniscus ppa-miR-33 mature miRNA
• Sequence: 6 - GUGCAUUGUAGUUGCAUUG - 24
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24