miRBase entry: ppa-mir-33

Stem-loop ppa-mir-33


Accession
MI0002689
Description
Pan paniscus ppa-mir-33 precursor miRNA


Sequence


cugugGUGCAUUGUAGUUGCAUUGcauguucuggugguacccaugcaauguuuccacagugcaucacag
((((((((((((((.(..((((((((((....(((...)))))))))))))..).))))))))))))))

Structure
              A UU          uucu   g 
cugugGUGCAUUGU G  GCAUUGcaug    ggu  
|||||||||||||| |  ||||||||||    ||| g
gacacuacgugaca c  uguaacguac    cca  
              c uu          ----   u 


Annotation confidence Low
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Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
chr22: 40878595-40878663 [+]

Database links

Mature ppa-miR-33

Accession MIMAT0002397
Description Pan paniscus ppa-miR-33 mature miRNA
Sequence 6 - GUGCAUUGUAGUUGCAUUG - 24
Evidence not_experimental

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24