Stem-loop sla-mir-100

Accession

MI0002715

Description

Saguinus labiatus sla-mir-100 precursor miRNA

Sequence

ccuguugccacaAACCCGUAGAUCCGAACUUGUGguguuaaugugcacaagcuugugucuauagguaugugucuguuagg
((((....((((.(((.((((((.(((.((((((...........)))))).))).)))))).))).)))).....))))

Structure

    -uugc    A   C      C   A      gugu 
ccug     caca ACC GUAGAU CGA CUUGUG    u
||||     |||| ||| |||||| ||| ||||||    a
ggau     gugu ugg uaucug guu gaacac    a
    ugucu    a   a      u   c      gugu 

Annotation confidence Not enough data

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

Unknown

Mature sla-miR-100

• Accession: MIMAT0002423
• Description: Saguinus labiatus sla-miR-100 mature miRNA
• Sequence: 13 - AACCCGUAGAUCCGAACUUGUG - 34
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24